WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.3f.3 Sequence Name  F29G6.3f.3
Length (nt)  6554   Chromosome Location  X: 11511563-11519051
Chromosome . Primary Identifier  X Chromosome Location . Start  11511563
Chromosome Location . End  11519051 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3f.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.3f F29G6.3f 5406   X: 11512963-11517504

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.3f.3 11511563 11519051 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253373   283   X: 11511563-11511845 Caenorhabditis elegans
Exon253381   48   X: 11511892-11511939 Caenorhabditis elegans
Exon253388   424   X: 11511986-11512409 Caenorhabditis elegans
Exon253401   58   X: 11512523-11512580 Caenorhabditis elegans
Exon253408   4843   X: 11512662-11517504 Caenorhabditis elegans
Exon253427   108   X: 11517551-11517658 Caenorhabditis elegans
Exon253434   102   X: 11517705-11517806 Caenorhabditis elegans
Exon253441   105   X: 11517854-11517958 Caenorhabditis elegans
Exon253448   118   X: 11518005-11518122 Caenorhabditis elegans
Exon253455   101   X: 11518180-11518280 Caenorhabditis elegans
Exon253463   66   X: 11518324-11518389 Caenorhabditis elegans
Exon253469   81   X: 11518441-11518521 Caenorhabditis elegans
Exon253475   54   X: 11518734-11518787 Caenorhabditis elegans
Exon253481   101   X: 11518845-11518945 Caenorhabditis elegans
Exon253483   62   X: 11518990-11519051 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.3f.3 11511563 11519051 -1

1 Sequence

Length
6554

1 Sequence Ontology Term

Identifier Name Description
transcript