WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F29G6.3f Sequence Name  F29G6.3f
Length (nt)  5406   Chromosome Location  X: 11512963-11517504
Chromosome . Primary Identifier  X Chromosome Location . Start  11512963
Chromosome Location . End  11517504
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48042 HPO-34, isoform f 206.9 1801 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00073063
WBRNAi00000230
WBRNAi00045938
WBRNAi00091111
WBRNAi00091155
WBRNAi00091154
WBRNAi00091157
WBRNAi00091156
WBRNAi00031586
WBRNAi00001803
WBRNAi00008725
WBRNAi00025318
WBRNAi00088777
WBRNAi00088670

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F29G6.3f 11512963 11517504 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F29G6.3f 11512963 11517504 -1
CDS:F29G6.3f 11517551 11517658 -1
CDS:F29G6.3f 11517705 11517806 -1
CDS:F29G6.3f 11517854 11517958 -1
CDS:F29G6.3f 11518005 11518122 -1
CDS:F29G6.3f 11518180 11518280 -1
CDS:F29G6.3f 11518324 11518389 -1
CDS:F29G6.3f 11518441 11518521 -1
CDS:F29G6.3f 11518734 11518787 -1
CDS:F29G6.3f 11518845 11518945 -1
CDS:F29G6.3f 11518990 11519017 -1

1 Sequence

Length
5406

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F29G6.3f.1 F29G6.3f.1 6528   X: 11511560-11519066
Transcript:F29G6.3f.2 F29G6.3f.2 6480   X: 11511562-11519066
Transcript:F29G6.3f.3 F29G6.3f.3 6554   X: 11511563-11519051