WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.3d.1 Sequence Name  F29G6.3d.1
Length (nt)  4089   Chromosome Location  X: 11511738-11518380
Chromosome . Primary Identifier  X Chromosome Location . Start  11511738
Chromosome Location . End  11518380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.3d F29G6.3d 4089   X: 11511738-11511845

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.3d.1 11511738 11518380 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253435   108   X: 11511738-11511845 Caenorhabditis elegans
Exon253439   48   X: 11511892-11511939 Caenorhabditis elegans
Exon253446   108   X: 11511986-11512093 Caenorhabditis elegans
Exon253453   272   X: 11512138-11512409 Caenorhabditis elegans
Exon253459   58   X: 11512523-11512580 Caenorhabditis elegans
Exon253466   138   X: 11512662-11512799 Caenorhabditis elegans
Exon253474   381   X: 11514691-11515071 Caenorhabditis elegans
Exon253479   2385   X: 11515120-11517504 Caenorhabditis elegans
Exon253485   108   X: 11517551-11517658 Caenorhabditis elegans
Exon253492   102   X: 11517705-11517806 Caenorhabditis elegans
Exon253499   105   X: 11517854-11517958 Caenorhabditis elegans
Exon253506   118   X: 11518005-11518122 Caenorhabditis elegans
Exon253513   101   X: 11518180-11518280 Caenorhabditis elegans
Exon253517   57   X: 11518324-11518380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29G6.3d.1 11511738 11518380 -1

1 Sequence

Length
4089

1 Sequence Ontology Term

Identifier Name Description
transcript