WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04F8.6.1 Sequence Name  T04F8.6.1
Length (nt)  2801   Chromosome Location  X: 11667127-11672309
Chromosome . Primary Identifier  X Chromosome Location . Start  11667127
Chromosome Location . End  11672309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04F8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011444 noca-2 T04F8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04F8.6 T04F8.6 2385   X: 11667158-11667217

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04F8.6.1 11667127 11672309 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253905   91   X: 11667127-11667217 Caenorhabditis elegans
Exon253906   144   X: 11667506-11667649 Caenorhabditis elegans
Exon253907   125   X: 11667702-11667826 Caenorhabditis elegans
Exon253908   166   X: 11667899-11668064 Caenorhabditis elegans
Exon253909   74   X: 11668114-11668187 Caenorhabditis elegans
Exon253910   79   X: 11668254-11668332 Caenorhabditis elegans
Exon253911   146   X: 11668383-11668528 Caenorhabditis elegans
Exon253912   141   X: 11668812-11668952 Caenorhabditis elegans
Exon253913   91   X: 11669021-11669111 Caenorhabditis elegans
Exon253914   252   X: 11669160-11669411 Caenorhabditis elegans
Exon253916   96   X: 11669890-11669985 Caenorhabditis elegans
Exon253917   166   X: 11670031-11670196 Caenorhabditis elegans
Exon253918   55   X: 11670244-11670298 Caenorhabditis elegans
Exon253919   91   X: 11670350-11670440 Caenorhabditis elegans
Exon253920   78   X: 11670738-11670815 Caenorhabditis elegans
Exon253921   134   X: 11670862-11670995 Caenorhabditis elegans
Exon253922   193   X: 11671042-11671234 Caenorhabditis elegans
Exon253923   167   X: 11671581-11671747 Caenorhabditis elegans
Exon253924   512   X: 11671798-11672309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04F8.6.1 11667127 11672309 1

1 Sequence

Length
2801

1 Sequence Ontology Term

Identifier Name Description
transcript