WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.9.2 Sequence Name  F59A3.9.2
Length (nt)  1605   Chromosome Location  I: 5530614-5533719
Chromosome . Primary Identifier  I Chromosome Location . Start  5530614
Chromosome Location . End  5533719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019082 pup-3 F59A3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.9 F59A3.9 1449   I: 5530761-5531298

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.9.2 5530614 5533719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13186   685   I: 5530614-5531298 Caenorhabditis elegans
Exon13189   193   I: 5531886-5532078 Caenorhabditis elegans
Exon13191   129   I: 5532131-5532259 Caenorhabditis elegans
Exon13193   109   I: 5532414-5532522 Caenorhabditis elegans
Exon13195   185   I: 5532893-5533077 Caenorhabditis elegans
Exon13197   100   I: 5533125-5533224 Caenorhabditis elegans
Exon13199   204   I: 5533516-5533719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A3.9.2 5530614 5533719 -1

1 Sequence

Length
1605

1 Sequence Ontology Term

Identifier Name Description
transcript