WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59A3.9 Sequence Name  F59A3.9
Length (nt)  1449   Chromosome Location  I: 5530761-5531298
Chromosome . Primary Identifier  I Chromosome Location . Start  5530761
Chromosome Location . End  5531298
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11432 PUP-3 55.9 482 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001639
WBRNAi00049110
WBRNAi00003861
WBRNAi00033161
WBRNAi00087780

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59A3.9 5530761 5531298 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019082 pup-3 F59A3.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59A3.9 5530761 5531298 -1
CDS:F59A3.9 5531886 5532078 -1
CDS:F59A3.9 5532131 5532259 -1
CDS:F59A3.9 5532414 5532522 -1
CDS:F59A3.9 5532893 5533077 -1
CDS:F59A3.9 5533125 5533224 -1
CDS:F59A3.9 5533516 5533710 -1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59A3.9.2 F59A3.9.2 1605   I: 5530614-5533719
Transcript:F59A3.9.1 F59A3.9.1 1724   I: 5530616-5534649