WormMine: Gene WBGene00196433

• WormBase Gene ID: WBGene00196433
• Gene Name: C40H5.11
• Sequence Name: C40H5.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by adr-1 and adr-2 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 64

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00196433

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C40H5.11	C40H5.11	64	X: 11774608-11774671

Other

0 CDSs

0 RNAi Result

7 Allele

• gk964260
• gk964029
• gk962707
• gk964028
• gk963810
• tm8423
• WBVar01987787

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00196433
• Start: 11774608
• End: 11774671
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_11774672..11775189
• Length (nt): 518
• Chromosome Location: X: 11774672-11775189
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in adr-1(tm668) and adr-1(gv6) comparing to in N2 at L4 larva stage.	DESeq FDR <= 0.05	WBPaper00056617:adr-1_upregulated_L4_transcript
	Transcripts that showed significantly increased expression in adr-2(ok735) and adr-2(gv42) comparing to in N2 at L4 larva stage.	DESeq FDR <= 0.05	WBPaper00056617:adr-2_upregulated_L4_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00196433
• Start: 11774608
• End: 11774671
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 64

1 Sequence Ontology Term