WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y102F5A.1 Sequence Name  Y102F5A.1
Length (nt)  1200   Chromosome Location  X: 11781275-11781341
Chromosome . Primary Identifier  X Chromosome Location . Start  11781275
Chromosome Location . End  11781341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102F5A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19293 Y102F5A.1 46.2 399 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055163
WBRNAi00019826

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y102F5A.1 11781275 11781341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013631 Y102F5A.1 Y102F5A.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y102F5A.1 11781275 11781341 -1
CDS:Y102F5A.1 11781647 11781804 -1
CDS:Y102F5A.1 11781859 11781959 -1
CDS:Y102F5A.1 11782549 11782637 -1
CDS:Y102F5A.1 11782680 11782955 -1
CDS:Y102F5A.1 11782999 11783094 -1
CDS:Y102F5A.1 11783356 11783570 -1
CDS:Y102F5A.1 11783618 11783755 -1
CDS:Y102F5A.1 11784271 11784330 -1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y102F5A.1.1 Y102F5A.1.1 1200   X: 11781275-11784330