WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3a.1 Sequence Name  C34E11.3a.1
Length (nt)  5374   Chromosome Location  X: 11824004-11836162
Chromosome . Primary Identifier  X Chromosome Location . Start  11824004
Chromosome Location . End  11836162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3a C34E11.3a 4911   X: 11826093-11826234

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3a.1 11824004 11836162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254295   116   X: 11824004-11824119 Caenorhabditis elegans
Exon254305   209   X: 11826026-11826234 Caenorhabditis elegans
Exon254307   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254314   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254321   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254328   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254335   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254342   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254349   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254356   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254363   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254370   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254377   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254384   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254391   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254398   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254405   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254412   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254421   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254429   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254437   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254445   129   X: 11834388-11834516 Caenorhabditis elegans
Exon254450   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254458   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254466   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254474   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254489   370   X: 11835793-11836162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3a.1 11824004 11836162 1

1 Sequence

Length
5374

1 Sequence Ontology Term

Identifier Name Description
transcript