WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3g.1 Sequence Name  C34E11.3g.1
Length (nt)  4821   Chromosome Location  X: 11824184-11835882
Chromosome . Primary Identifier  X Chromosome Location . Start  11824184
Chromosome Location . End  11835882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3g C34E11.3g 4821   X: 11824184-11824258

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3g.1 11824184 11835882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254298   75   X: 11824184-11824258 Caenorhabditis elegans
Exon254303   106   X: 11824311-11824416 Caenorhabditis elegans
Exon254313   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254320   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254327   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254334   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254341   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254348   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254355   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254362   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254369   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254376   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254383   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254390   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254397   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254404   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254411   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254418   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254428   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254436   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254444   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254457   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254465   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254473   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254481   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254485   90   X: 11835793-11835882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3g.1 11824184 11835882 1

1 Sequence

Length
4821

1 Sequence Ontology Term

Identifier Name Description
transcript