WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3c.2 Sequence Name  C34E11.3c.2
Length (nt)  1742   Chromosome Location  X: 11832768-11835882
Chromosome . Primary Identifier  X Chromosome Location . Start  11832768
Chromosome Location . End  11835882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3c C34E11.3c 1371   X: 11833438-11833599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.3c.2 11832768 11835882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254419   53   X: 11832768-11832820 Caenorhabditis elegans
Exon254420   117   X: 11832882-11832998 Caenorhabditis elegans
Exon254424   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254432   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254440   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254447   129   X: 11834388-11834516 Caenorhabditis elegans
Exon254453   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254461   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254469   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254477   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254483   90   X: 11835793-11835882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E11.3c.2 11832768 11835882 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript