WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49F5.1 Sequence Name  C49F5.1
Length (nt)  1212   Chromosome Location  X: 11966028-11966096
Chromosome . Primary Identifier  X Chromosome Location . Start  11966028
Chromosome Location . End  11966096
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49F5.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08852 SAMS-1 43.6 403 Caenorhabditis elegans
 

Other

60 RNAi

WormBase ID
WBRNAi00095532
WBRNAi00042806
WBRNAi00042807
WBRNAi00024869
WBRNAi00008536
WBRNAi00085994
WBRNAi00085996
WBRNAi00102712
WBRNAi00029983
WBRNAi00102552
WBRNAi00086004
WBRNAi00063957
WBRNAi00063958
WBRNAi00084664
WBRNAi00084666
WBRNAi00066683
WBRNAi00001324
WBRNAi00096930
WBRNAi00085993
WBRNAi00085998
WBRNAi00102553
WBRNAi00086016
WBRNAi00102554
WBRNAi00084673
WBRNAi00102548
WBRNAi00102561
WBRNAi00084670
WBRNAi00095896
WBRNAi00095973
WBRNAi00096048

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49F5.1 11966028 11966096 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008205 sams-1 C49F5.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49F5.1 11966028 11966096 1
CDS:C49F5.1 11966150 11966333 1
CDS:C49F5.1 11966388 11967180 1
CDS:C49F5.1 11967228 11967393 1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49F5.1.2 C49F5.1.2 1850   X: 11965962-11968132
Transcript:C49F5.1.1 C49F5.1.1 1530   X: 11965962-11969893
Transcript:C49F5.1.3 C49F5.1.3 2009   X: 11965962-11968124