WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0198.2b.2 Sequence Name  B0198.2b.2
Length (nt)  1284   Chromosome Location  X: 12028711-12031619
Chromosome . Primary Identifier  X Chromosome Location . Start  12028711
Chromosome Location . End  12031619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0198.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007115 B0198.2 B0198.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0198.2b B0198.2b 933   X: 12028940-12028986

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0198.2b.2 12028711 12031619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254793   276   X: 12028711-12028986 Caenorhabditis elegans
Exon254798   88   X: 12029084-12029171 Caenorhabditis elegans
Exon254801   126   X: 12029848-12029973 Caenorhabditis elegans
Exon254804   342   X: 12030028-12030369 Caenorhabditis elegans
Exon254806   195   X: 12030994-12031188 Caenorhabditis elegans
Exon254809   257   X: 12031363-12031619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0198.2b.2 12028711 12031619 1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
transcript