WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0198.2b Sequence Name  B0198.2b
Length (nt)  933   Chromosome Location  X: 12028940-12028986
Chromosome . Primary Identifier  X Chromosome Location . Start  12028940
Chromosome Location . End  12028986
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0198.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44244 B0198.2, isoform b 34.4 310 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00038699
WBRNAi00009575
WBRNAi00027973

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0198.2b 12028940 12028986 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007115 B0198.2 B0198.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0198.2b 12028940 12028986 1
CDS:B0198.2b 12029084 12029171 1
CDS:B0198.2b 12029848 12029973 1
CDS:B0198.2b 12030028 12030369 1
CDS:B0198.2b 12030994 12031188 1
CDS:B0198.2b 12031363 12031497 1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0198.2b.1 B0198.2b.1 1381   X: 12025739-12031619
Transcript:B0198.2b.2 B0198.2b.2 1284   X: 12028711-12031619