WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H10.8.1 Sequence Name  T01H10.8.1
Length (nt)  8490   Chromosome Location  X: 12128144-12141151
Chromosome . Primary Identifier  X Chromosome Location . Start  12128144
Chromosome Location . End  12141151 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011361 lyst-1 T01H10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H10.8 T01H10.8 8283   X: 12128351-12128489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T01H10.8.1 12128144 12141151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255005   346   X: 12128144-12128489 Caenorhabditis elegans
Exon255006   209   X: 12130090-12130298 Caenorhabditis elegans
Exon255007   596   X: 12130353-12130948 Caenorhabditis elegans
Exon255008   170   X: 12131226-12131395 Caenorhabditis elegans
Exon255009   173   X: 12131447-12131619 Caenorhabditis elegans
Exon255010   107   X: 12131665-12131771 Caenorhabditis elegans
Exon255011   388   X: 12131819-12132206 Caenorhabditis elegans
Exon255012   76   X: 12132249-12132324 Caenorhabditis elegans
Exon255013   236   X: 12132370-12132605 Caenorhabditis elegans
Exon255014   465   X: 12132756-12133220 Caenorhabditis elegans
Exon255015   269   X: 12133264-12133532 Caenorhabditis elegans
Exon255016   121   X: 12133586-12133706 Caenorhabditis elegans
Exon255017   101   X: 12133777-12133877 Caenorhabditis elegans
Exon255018   731   X: 12133928-12134658 Caenorhabditis elegans
Exon255019   104   X: 12134845-12134948 Caenorhabditis elegans
Exon255020   297   X: 12134992-12135288 Caenorhabditis elegans
Exon255021   158   X: 12135333-12135490 Caenorhabditis elegans
Exon255022   228   X: 12135534-12135761 Caenorhabditis elegans
Exon255023   202   X: 12135806-12136007 Caenorhabditis elegans
Exon255024   183   X: 12136119-12136301 Caenorhabditis elegans
Exon255025   428   X: 12136346-12136773 Caenorhabditis elegans
Exon255026   109   X: 12136879-12136987 Caenorhabditis elegans
Exon255027   91   X: 12137033-12137123 Caenorhabditis elegans
Exon255028   174   X: 12137171-12137344 Caenorhabditis elegans
Exon255029   221   X: 12137732-12137952 Caenorhabditis elegans
Exon255030   163   X: 12138023-12138185 Caenorhabditis elegans
Exon255031   343   X: 12138229-12138571 Caenorhabditis elegans
Exon255032   112   X: 12138621-12138732 Caenorhabditis elegans
Exon255033   564   X: 12138777-12139340 Caenorhabditis elegans
Exon255034   282   X: 12139393-12139674 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T01H10.8.1 12128144 12141151 -1

1 Sequence

Length
8490

1 Sequence Ontology Term

Identifier Name Description
transcript