WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01H10.8 Sequence Name  T01H10.8
Length (nt)  8283   Chromosome Location  X: 12128351-12128489
Chromosome . Primary Identifier  X Chromosome Location . Start  12128351
Chromosome Location . End  12128489
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H10.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43291 LYST-1 320.4 2760 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001557
WBRNAi00052172
WBRNAi00018000
WBRNAi00090881

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01H10.8 12128351 12128489 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011361 lyst-1 T01H10.8 Caenorhabditis elegans

36 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01H10.8 12128351 12128489 -1
CDS:T01H10.8 12130090 12130298 -1
CDS:T01H10.8 12130353 12130948 -1
CDS:T01H10.8 12131226 12131395 -1
CDS:T01H10.8 12131447 12131619 -1
CDS:T01H10.8 12131665 12131771 -1
CDS:T01H10.8 12131819 12132206 -1
CDS:T01H10.8 12132249 12132324 -1
CDS:T01H10.8 12132370 12132605 -1
CDS:T01H10.8 12132756 12133220 -1
CDS:T01H10.8 12133264 12133532 -1
CDS:T01H10.8 12133586 12133706 -1
CDS:T01H10.8 12133777 12133877 -1
CDS:T01H10.8 12133928 12134658 -1
CDS:T01H10.8 12134845 12134948 -1
CDS:T01H10.8 12134992 12135288 -1
CDS:T01H10.8 12135333 12135490 -1
CDS:T01H10.8 12135534 12135761 -1
CDS:T01H10.8 12135806 12136007 -1
CDS:T01H10.8 12136119 12136301 -1
CDS:T01H10.8 12136346 12136773 -1
CDS:T01H10.8 12136879 12136987 -1
CDS:T01H10.8 12137033 12137123 -1
CDS:T01H10.8 12137171 12137344 -1
CDS:T01H10.8 12137732 12137952 -1
CDS:T01H10.8 12138023 12138185 -1
CDS:T01H10.8 12138229 12138571 -1
CDS:T01H10.8 12138621 12138732 -1
CDS:T01H10.8 12138777 12139340 -1
CDS:T01H10.8 12139393 12139674 -1

1 Sequence

Length
8283

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01H10.8.1 T01H10.8.1 8490   X: 12128144-12141151