WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A2.10.1 Sequence Name  F17A2.10.1
Length (nt)  954   Chromosome Location  X: 12332095-12333302
Chromosome . Primary Identifier  X Chromosome Location . Start  12332095
Chromosome Location . End  12333302 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005124 srd-46 F17A2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A2.10 F17A2.10 954   X: 12332095-12332379

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.10.1 12332095 12333302 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255345   285   X: 12332095-12332379 Caenorhabditis elegans
Exon255346   138   X: 12332449-12332586 Caenorhabditis elegans
Exon255347   197   X: 12332638-12332834 Caenorhabditis elegans
Exon255348   79   X: 12332876-12332954 Caenorhabditis elegans
Exon255349   79   X: 12333000-12333078 Caenorhabditis elegans
Exon255350   176   X: 12333127-12333302 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.10.1 12332095 12333302 1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript