WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06A5.6 Sequence Name  C06A5.6
Length (nt)  2076   Chromosome Location  I: 5983346-5983435
Chromosome . Primary Identifier  I Chromosome Location . Start  5983346
Chromosome Location . End  5983435
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07953 SIMR-1 76.8 691 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039823
WBRNAi00002912
WBRNAi00085086

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06A5.6 5983346 5983435 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015504 simr-1 C06A5.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06A5.6 5983346 5983435 -1
CDS:C06A5.6 5983490 5983626 -1
CDS:C06A5.6 5983770 5983911 -1
CDS:C06A5.6 5983961 5984079 -1
CDS:C06A5.6 5984126 5984754 -1
CDS:C06A5.6 5984805 5985469 -1
CDS:C06A5.6 5985516 5985655 -1
CDS:C06A5.6 5985706 5985859 -1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06A5.6.1 C06A5.6.1 2788   I: 5981766-5985869
Transcript:C06A5.6.3 C06A5.6.3 2785   I: 5981766-5985871
Transcript:C06A5.6.2 C06A5.6.2 2396   I: 5983036-5985869