WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D6.2b.1 Sequence Name  C16D6.2b.1
Length (nt)  2065   Chromosome Location  X: 12536982-12551677
Chromosome . Primary Identifier  X Chromosome Location . Start  12536982
Chromosome Location . End  12551677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D6.2b C16D6.2b 1473   X: 12537468-12537684

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2b.1 12536982 12551677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255848   703   X: 12536982-12537684 Caenorhabditis elegans
Exon255852   98   X: 12537993-12538090 Caenorhabditis elegans
Exon255858   174   X: 12539421-12539594 Caenorhabditis elegans
Exon255864   118   X: 12539687-12539804 Caenorhabditis elegans
Exon255870   359   X: 12539860-12540218 Caenorhabditis elegans
Exon255876   120   X: 12540270-12540389 Caenorhabditis elegans
Exon255882   154   X: 12540438-12540591 Caenorhabditis elegans
Exon255888   98   X: 12540641-12540738 Caenorhabditis elegans
Exon255895   70   X: 12540790-12540859 Caenorhabditis elegans
Exon255899   133   X: 12551457-12551589 Caenorhabditis elegans
Exon255903   38   X: 12551640-12551677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2b.1 12536982 12551677 -1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript