WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R09A8.3 Sequence Name  R09A8.3
Length (nt)  2454   Chromosome Location  X: 12625241-12625359
Chromosome . Primary Identifier  X Chromosome Location . Start  12625241
Chromosome Location . End  12625359
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A8.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03539 IVNS-1 90.9 817 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051584
WBRNAi00017621
WBRNAi00034761

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R09A8.3 12625241 12625359 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006493 ivns-1 R09A8.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R09A8.3 12625241 12625359 -1
CDS:R09A8.3 12625408 12625508 -1
CDS:R09A8.3 12625672 12626587 -1
CDS:R09A8.3 12626702 12627029 -1
CDS:R09A8.3 12627114 12627257 -1
CDS:R09A8.3 12627452 12627579 -1
CDS:R09A8.3 12627626 12627750 -1
CDS:R09A8.3 12628078 12628273 -1
CDS:R09A8.3 12628323 12628488 -1
CDS:R09A8.3 12628652 12628789 -1
CDS:R09A8.3 12628951 12629043 -1

1 Sequence

Length
2454

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R09A8.3.1 R09A8.3.1 3107   X: 12624655-12629110
Transcript:R09A8.3.2 R09A8.3.2 3197   X: 12624665-12634354