WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H36L18.1.1 Sequence Name  H36L18.1.1
Length (nt)  1323   Chromosome Location  X: 12647117-12651487
Chromosome . Primary Identifier  X Chromosome Location . Start  12647117
Chromosome Location . End  12651487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H36L18.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010423 zmp-5 H36L18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H36L18.1 H36L18.1 1218   X: 12647252-12647308

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H36L18.1.1 12647117 12651487 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256017   72   X: 12647117-12647188 Caenorhabditis elegans
Exon256018   90   X: 12647219-12647308 Caenorhabditis elegans
Exon256019   49   X: 12647389-12647437 Caenorhabditis elegans
Exon256020   101   X: 12648290-12648390 Caenorhabditis elegans
Exon256022   124   X: 12648999-12649122 Caenorhabditis elegans
Exon256023   87   X: 12649179-12649265 Caenorhabditis elegans
Exon256024   135   X: 12649842-12649976 Caenorhabditis elegans
Exon256025   153   X: 12650021-12650173 Caenorhabditis elegans
Exon256026   131   X: 12650214-12650344 Caenorhabditis elegans
Exon256027   145   X: 12650885-12651029 Caenorhabditis elegans
Exon256028   80   X: 12651075-12651154 Caenorhabditis elegans
Exon256029   156   X: 12651332-12651487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H36L18.1.1 12647117 12651487 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
transcript