WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02B4.1a.1 Sequence Name  C02B4.1a.1
Length (nt)  4802   Chromosome Location  X: 12678832-12689279
Chromosome . Primary Identifier  X Chromosome Location . Start  12678832
Chromosome Location . End  12689279 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02B4.1a C02B4.1a 4386   X: 12679152-12679211

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C02B4.1a.1 12678832 12689279 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256064   380   X: 12678832-12679211 Caenorhabditis elegans
Exon256065   66   X: 12679384-12679449 Caenorhabditis elegans
Exon256067   135   X: 12679496-12679630 Caenorhabditis elegans
Exon256069   78   X: 12679932-12680009 Caenorhabditis elegans
Exon256071   129   X: 12680497-12680625 Caenorhabditis elegans
Exon256073   142   X: 12681253-12681394 Caenorhabditis elegans
Exon256075   142   X: 12681498-12681639 Caenorhabditis elegans
Exon256077   145   X: 12681687-12681831 Caenorhabditis elegans
Exon256079   281   X: 12681886-12682166 Caenorhabditis elegans
Exon256081   138   X: 12682216-12682353 Caenorhabditis elegans
Exon256083   169   X: 12682906-12683074 Caenorhabditis elegans
Exon256085   93   X: 12683121-12683213 Caenorhabditis elegans
Exon256087   170   X: 12683269-12683438 Caenorhabditis elegans
Exon256089   176   X: 12683486-12683661 Caenorhabditis elegans
Exon256091   214   X: 12683717-12683930 Caenorhabditis elegans
Exon256093   271   X: 12683976-12684246 Caenorhabditis elegans
Exon256095   77   X: 12684422-12684498 Caenorhabditis elegans
Exon256097   199   X: 12684544-12684742 Caenorhabditis elegans
Exon256099   277   X: 12684829-12685105 Caenorhabditis elegans
Exon256101   110   X: 12685157-12685266 Caenorhabditis elegans
Exon256103   178   X: 12685317-12685494 Caenorhabditis elegans
Exon256105   98   X: 12685539-12685636 Caenorhabditis elegans
Exon256107   243   X: 12685682-12685924 Caenorhabditis elegans
Exon256109   278   X: 12686450-12686727 Caenorhabditis elegans
Exon256111   95   X: 12687204-12687298 Caenorhabditis elegans
Exon256113   174   X: 12687429-12687602 Caenorhabditis elegans
Exon256115   76   X: 12687687-12687762 Caenorhabditis elegans
Exon256118   268   X: 12689012-12689279 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C02B4.1a.1 12678832 12689279 1

1 Sequence

Length
4802

1 Sequence Ontology Term

Identifier Name Description
transcript