WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5a.1 Sequence Name  T08B2.5a.1
Length (nt)  2863   Chromosome Location  I: 6215775-6219909
Chromosome . Primary Identifier  I Chromosome Location . Start  6215775
Chromosome Location . End  6219909 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5a T08B2.5a 2775   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5a.1 6215775 6219909 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15377   73   I: 6215775-6215847 Caenorhabditis elegans
Exon15378   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15386   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15395   233   I: 6216359-6216591 Caenorhabditis elegans
Exon15399   116   I: 6216678-6216793 Caenorhabditis elegans
Exon15401   132   I: 6217123-6217254 Caenorhabditis elegans
Exon15405   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15412   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15419   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15426   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15433   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15439   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15446   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15453   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15460   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15467   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15477   215   I: 6219695-6219909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5a.1 6215775 6219909 1

1 Sequence

Length
2863

1 Sequence Ontology Term

Identifier Name Description
transcript