WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08B2.5a Sequence Name  T08B2.5a
Length (nt)  2775   Chromosome Location  I: 6215791-6215847
Chromosome . Primary Identifier  I Chromosome Location . Start  6215791
Chromosome Location . End  6215847
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25984 RBM-5, isoform a 104.3 924 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00052842
WBRNAi00052843
WBRNAi00026234
WBRNAi00004168
WBRNAi00004169
WBRNAi00026233
WBRNAi00102182
WBRNAi00035344
WBRNAi00117091

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08B2.5a 6215791 6215847 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08B2.5a 6215791 6215847 1
CDS:T08B2.5a 6215919 6215987 1
CDS:T08B2.5a 6216062 6216168 1
CDS:T08B2.5a 6216359 6216591 1
CDS:T08B2.5a 6216678 6216793 1
CDS:T08B2.5a 6217123 6217254 1
CDS:T08B2.5a 6217303 6217452 1
CDS:T08B2.5a 6217500 6217604 1
CDS:T08B2.5a 6217651 6217768 1
CDS:T08B2.5a 6217818 6218024 1
CDS:T08B2.5a 6218068 6218184 1
CDS:T08B2.5a 6218230 6218309 1
CDS:T08B2.5a 6218353 6218515 1
CDS:T08B2.5a 6218564 6218926 1
CDS:T08B2.5a 6218976 6219256 1
CDS:T08B2.5a 6219316 6219649 1
CDS:T08B2.5a 6219695 6219837 1

1 Sequence

Length
2775

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08B2.5a.1 T08B2.5a.1 2863   I: 6215775-6219909