WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E10.1.1 Sequence Name  F22E10.1.1
Length (nt)  4137   Chromosome Location  X: 12731807-12737441
Chromosome . Primary Identifier  X Chromosome Location . Start  12731807
Chromosome Location . End  12737441 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004006 pgp-12 F22E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E10.1 F22E10.1 3957   X: 12731850-12731927

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.1.1 12731807 12737441 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256154   121   X: 12731807-12731927 Caenorhabditis elegans
Exon256155   165   X: 12732195-12732359 Caenorhabditis elegans
Exon256156   98   X: 12732406-12732503 Caenorhabditis elegans
Exon256157   127   X: 12732550-12732676 Caenorhabditis elegans
Exon256158   134   X: 12732729-12732862 Caenorhabditis elegans
Exon256159   172   X: 12732907-12733078 Caenorhabditis elegans
Exon256160   125   X: 12733437-12733561 Caenorhabditis elegans
Exon256161   289   X: 12733611-12733899 Caenorhabditis elegans
Exon256162   839   X: 12733947-12734785 Caenorhabditis elegans
Exon256163   427   X: 12734900-12735326 Caenorhabditis elegans
Exon256164   363   X: 12735373-12735735 Caenorhabditis elegans
Exon256165   242   X: 12735780-12736021 Caenorhabditis elegans
Exon256166   478   X: 12736206-12736683 Caenorhabditis elegans
Exon256167   219   X: 12736730-12736948 Caenorhabditis elegans
Exon256168   338   X: 12737104-12737441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.1.1 12731807 12737441 1

1 Sequence

Length
4137

1 Sequence Ontology Term

Identifier Name Description
transcript