WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E10.3.1 Sequence Name  F22E10.3.1
Length (nt)  4293   Chromosome Location  X: 12744723-12749580
Chromosome . Primary Identifier  X Chromosome Location . Start  12744723
Chromosome Location . End  12749580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004008 pgp-14 F22E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E10.3 F22E10.3 3984   X: 12745007-12745207

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.3.1 12744723 12749580 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256183   485   X: 12744723-12745207 Caenorhabditis elegans
Exon256184   1302   X: 12745261-12746562 Caenorhabditis elegans
Exon256185   424   X: 12746614-12747037 Caenorhabditis elegans
Exon256186   1247   X: 12747087-12748333 Caenorhabditis elegans
Exon256187   172   X: 12748381-12748552 Caenorhabditis elegans
Exon256188   359   X: 12748605-12748963 Caenorhabditis elegans
Exon256189   210   X: 12749224-12749433 Caenorhabditis elegans
Exon256190   94   X: 12749487-12749580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.3.1 12744723 12749580 -1

1 Sequence

Length
4293

1 Sequence Ontology Term

Identifier Name Description
transcript