WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H6.6b.1 Sequence Name  T22H6.6b.1
Length (nt)  1923   Chromosome Location  X: 12796310-12800572
Chromosome . Primary Identifier  X Chromosome Location . Start  12796310
Chromosome Location . End  12800572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H6.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001560 gei-3 T22H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H6.6b T22H6.6b 1923   X: 12796310-12796416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.6b.1 12796310 12800572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256322   107   X: 12796310-12796416 Caenorhabditis elegans
Exon256324   135   X: 12796467-12796601 Caenorhabditis elegans
Exon256327   277   X: 12796650-12796926 Caenorhabditis elegans
Exon256330   61   X: 12797113-12797173 Caenorhabditis elegans
Exon256333   85   X: 12797224-12797308 Caenorhabditis elegans
Exon256336   211   X: 12797378-12797588 Caenorhabditis elegans
Exon256339   96   X: 12798511-12798606 Caenorhabditis elegans
Exon256341   135   X: 12798801-12798935 Caenorhabditis elegans
Exon256343   300   X: 12799130-12799429 Caenorhabditis elegans
Exon256345   297   X: 12799516-12799812 Caenorhabditis elegans
Exon256347   113   X: 12800012-12800124 Caenorhabditis elegans
Exon256349   46   X: 12800219-12800264 Caenorhabditis elegans
Exon256350   60   X: 12800513-12800572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.6b.1 12796310 12800572 -1

1 Sequence

Length
1923

1 Sequence Ontology Term

Identifier Name Description
transcript