WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03G8.1.1 Sequence Name  R03G8.1.1
Length (nt)  1992   Chromosome Location  X: 13084573-13087646
Chromosome . Primary Identifier  X Chromosome Location . Start  13084573
Chromosome Location . End  13087646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010996 R03G8.1 R03G8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G8.1 R03G8.1 1992   X: 13084573-13084779

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.1.1 13084573 13087646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256873   207   X: 13084573-13084779 Caenorhabditis elegans
Exon256874   119   X: 13084821-13084939 Caenorhabditis elegans
Exon256875   156   X: 13084985-13085140 Caenorhabditis elegans
Exon256876   93   X: 13085193-13085285 Caenorhabditis elegans
Exon256877   113   X: 13085327-13085439 Caenorhabditis elegans
Exon256878   140   X: 13085483-13085622 Caenorhabditis elegans
Exon256879   89   X: 13085670-13085758 Caenorhabditis elegans
Exon256880   304   X: 13085859-13086162 Caenorhabditis elegans
Exon256881   222   X: 13086688-13086909 Caenorhabditis elegans
Exon256882   164   X: 13086966-13087129 Caenorhabditis elegans
Exon256883   109   X: 13087172-13087280 Caenorhabditis elegans
Exon256884   96   X: 13087327-13087422 Caenorhabditis elegans
Exon256885   180   X: 13087467-13087646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.1.1 13084573 13087646 1

1 Sequence

Length
1992

1 Sequence Ontology Term

Identifier Name Description
transcript