WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03G8.6.1 Sequence Name  R03G8.6.1
Length (nt)  2420   Chromosome Location  X: 13094552-13100510
Chromosome . Primary Identifier  X Chromosome Location . Start  13094552
Chromosome Location . End  13100510 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011000 R03G8.6 R03G8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G8.6 R03G8.6 2244   X: 13094636-13094681

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.6.1 13094552 13100510 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256868   130   X: 13094552-13094681 Caenorhabditis elegans
Exon256869   242   X: 13094730-13094971 Caenorhabditis elegans
Exon256870   219   X: 13095017-13095235 Caenorhabditis elegans
Exon256871   507   X: 13097544-13098050 Caenorhabditis elegans
Exon256872   111   X: 13098467-13098577 Caenorhabditis elegans
Exon256873   187   X: 13098622-13098808 Caenorhabditis elegans
Exon256874   185   X: 13098853-13099037 Caenorhabditis elegans
Exon256875   271   X: 13099485-13099755 Caenorhabditis elegans
Exon256876   188   X: 13099837-13100024 Caenorhabditis elegans
Exon256877   226   X: 13100071-13100296 Caenorhabditis elegans
Exon256878   154   X: 13100357-13100510 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.6.1 13094552 13100510 -1

1 Sequence

Length
2420

1 Sequence Ontology Term

Identifier Name Description
transcript