WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K06A5.6 Sequence Name  K06A5.6
Length (nt)  1260   Chromosome Location  I: 6464298-6464618
Chromosome . Primary Identifier  I Chromosome Location . Start  6464298
Chromosome Location . End  6464618
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11776 ACDH-3 45.8 419 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00050030
WBRNAi00003937
WBRNAi00033259
WBRNAi00001657
WBRNAi00117079
WBRNAi00084384
WBRNAi00084406
WBRNAi00103785
WBRNAi00102601
WBRNAi00090553

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K06A5.6 6464298 6464618 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019433 acdh-3 K06A5.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:K06A5.6 6464298 6464618 -1
CDS:K06A5.6 6464674 6464819 -1
CDS:K06A5.6 6464868 6465408 -1
CDS:K06A5.6 6465456 6465707 -1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K06A5.6.2 K06A5.6.2 1505   I: 6464195-6466941
Transcript:K06A5.6.1 K06A5.6.1 1363   I: 6464197-6465709