WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A5.6.2 Sequence Name  K06A5.6.2
Length (nt)  1505   Chromosome Location  I: 6464195-6466941
Chromosome . Primary Identifier  I Chromosome Location . Start  6464195
Chromosome Location . End  6466941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019433 acdh-3 K06A5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A5.6 K06A5.6 1260   I: 6464298-6464618

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.6.2 6464195 6466941 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16236   424   I: 6464195-6464618 Caenorhabditis elegans
Exon16239   146   I: 6464674-6464819 Caenorhabditis elegans
Exon16241   541   I: 6464868-6465408 Caenorhabditis elegans
Exon16243   254   I: 6465456-6465709 Caenorhabditis elegans
Exon16245   140   I: 6466802-6466941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.6.2 6464195 6466941 -1

1 Sequence

Length
1505

1 Sequence Ontology Term

Identifier Name Description
transcript