WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F7.1.1 Sequence Name  C29F7.1.1
Length (nt)  2271   Chromosome Location  X: 13409936-13414617
Chromosome . Primary Identifier  X Chromosome Location . Start  13409936
Chromosome Location . End  13414617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007810 C29F7.1 C29F7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F7.1 C29F7.1 1185   X: 13412628-13412723

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.1.1 13409936 13414617 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257584   88   X: 13409936-13410023 Caenorhabditis elegans
Exon257592   1019   X: 13411705-13412723 Caenorhabditis elegans
Exon257594   120   X: 13412780-13412899 Caenorhabditis elegans
Exon257597   133   X: 13413149-13413281 Caenorhabditis elegans
Exon257600   143   X: 13413327-13413469 Caenorhabditis elegans
Exon257603   87   X: 13413515-13413601 Caenorhabditis elegans
Exon257606   160   X: 13413649-13413808 Caenorhabditis elegans
Exon257609   266   X: 13413852-13414117 Caenorhabditis elegans
Exon257612   84   X: 13414314-13414397 Caenorhabditis elegans
Exon257615   171   X: 13414447-13414617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.1.1 13409936 13414617 1

1 Sequence

Length
2271

1 Sequence Ontology Term

Identifier Name Description
transcript