WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02D10.5.1 Sequence Name  F02D10.5.1
Length (nt)  1965   Chromosome Location  X: 13452667-13456542
Chromosome . Primary Identifier  X Chromosome Location . Start  13452667
Chromosome Location . End  13456542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02D10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001465 flr-1 F02D10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02D10.5 F02D10.5 1917   X: 13452706-13452805

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F02D10.5.1 13452667 13456542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257682   139   X: 13452667-13452805 Caenorhabditis elegans
Exon257683   159   X: 13452853-13453011 Caenorhabditis elegans
Exon257684   86   X: 13453105-13453190 Caenorhabditis elegans
Exon257685   84   X: 13453354-13453437 Caenorhabditis elegans
Exon257686   165   X: 13453486-13453650 Caenorhabditis elegans
Exon257687   136   X: 13453697-13453832 Caenorhabditis elegans
Exon257688   127   X: 13453917-13454043 Caenorhabditis elegans
Exon257689   154   X: 13454090-13454243 Caenorhabditis elegans
Exon257690   72   X: 13454405-13454476 Caenorhabditis elegans
Exon257691   140   X: 13454524-13454663 Caenorhabditis elegans
Exon257692   95   X: 13454707-13454801 Caenorhabditis elegans
Exon257695   108   X: 13454846-13454953 Caenorhabditis elegans
Exon257696   119   X: 13455002-13455120 Caenorhabditis elegans
Exon257697   119   X: 13455165-13455283 Caenorhabditis elegans
Exon257698   73   X: 13455369-13455441 Caenorhabditis elegans
Exon257699   120   X: 13455647-13455766 Caenorhabditis elegans
Exon257700   69   X: 13456474-13456542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F02D10.5.1 13452667 13456542 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript