WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01E6.4a.1 Sequence Name  R01E6.4a.1
Length (nt)  2059   Chromosome Location  X: 13532853-13536459
Chromosome . Primary Identifier  X Chromosome Location . Start  13532853
Chromosome Location . End  13536459 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01E6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01E6.4a R01E6.4a 1722   X: 13533043-13533195

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.4a.1 13532853 13536459 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257847   343   X: 13532853-13533195 Caenorhabditis elegans
Exon257848   123   X: 13533535-13533657 Caenorhabditis elegans
Exon257850   110   X: 13533715-13533824 Caenorhabditis elegans
Exon257852   103   X: 13533871-13533973 Caenorhabditis elegans
Exon257854   103   X: 13534026-13534128 Caenorhabditis elegans
Exon257856   190   X: 13534186-13534375 Caenorhabditis elegans
Exon257858   142   X: 13534430-13534571 Caenorhabditis elegans
Exon257860   191   X: 13534625-13534815 Caenorhabditis elegans
Exon257862   103   X: 13535217-13535319 Caenorhabditis elegans
Exon257864   138   X: 13535372-13535509 Caenorhabditis elegans
Exon257866   168   X: 13535557-13535724 Caenorhabditis elegans
Exon257869   345   X: 13536115-13536459 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.4a.1 13532853 13536459 1

1 Sequence

Length
2059

1 Sequence Ontology Term

Identifier Name Description
transcript