WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y12A6A.2 Sequence Name  Y12A6A.2
Length (nt)  228   Chromosome Location  X: 13618882-13618978
Chromosome . Primary Identifier  X Chromosome Location . Start  13618882
Chromosome Location . End  13618978
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y12A6A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19032 NLP-53 8.5 75 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055546
WBRNAi00020056
WBRNAi00036648

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y12A6A.2 13618882 13618978 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012440 nlp-53 Y12A6A.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y12A6A.2 13618882 13618978 1
CDS:Y12A6A.2 13619297 13619367 1
CDS:Y12A6A.2 13619419 13619478 1

1 Sequence

Length
228

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y12A6A.2.1 Y12A6A.2.1 688   X: 13618874-13619930