WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A11.4b.1 Sequence Name  C04A11.4b.1
Length (nt)  3261   Chromosome Location  X: 13687955-13695800
Chromosome . Primary Identifier  X Chromosome Location . Start  13687955
Chromosome Location . End  13695800 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A11.4b C04A11.4b 2790   X: 13687973-13688169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04A11.4b.1 13687955 13695800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258246   215   X: 13687955-13688169 Caenorhabditis elegans
Exon258248   49   X: 13688483-13688531 Caenorhabditis elegans
Exon258250   70   X: 13688701-13688770 Caenorhabditis elegans
Exon258252   99   X: 13688986-13689084 Caenorhabditis elegans
Exon258254   152   X: 13689512-13689663 Caenorhabditis elegans
Exon258256   72   X: 13689951-13690022 Caenorhabditis elegans
Exon258258   167   X: 13690073-13690239 Caenorhabditis elegans
Exon258260   85   X: 13690290-13690374 Caenorhabditis elegans
Exon258262   534   X: 13690700-13691233 Caenorhabditis elegans
Exon258264   173   X: 13692165-13692337 Caenorhabditis elegans
Exon258266   214   X: 13692389-13692602 Caenorhabditis elegans
Exon258268   82   X: 13692701-13692782 Caenorhabditis elegans
Exon258270   115   X: 13692881-13692995 Caenorhabditis elegans
Exon258272   108   X: 13693043-13693150 Caenorhabditis elegans
Exon258274   93   X: 13693508-13693600 Caenorhabditis elegans
Exon258276   271   X: 13693648-13693918 Caenorhabditis elegans
Exon258278   134   X: 13694034-13694167 Caenorhabditis elegans
Exon258280   130   X: 13694213-13694342 Caenorhabditis elegans
Exon258281   498   X: 13695303-13695800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04A11.4b.1 13687955 13695800 1

1 Sequence

Length
3261

1 Sequence Ontology Term

Identifier Name Description
transcript