WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A11.4a.1 Sequence Name  C04A11.4a.1
Length (nt)  3255   Chromosome Location  X: 13687955-13695801
Chromosome . Primary Identifier  X Chromosome Location . Start  13687955
Chromosome Location . End  13695801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A11.4a C04A11.4a 2859   X: 13687973-13688169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04A11.4a.1 13687955 13695801 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258245   215   X: 13687955-13688169 Caenorhabditis elegans
Exon258247   49   X: 13688483-13688531 Caenorhabditis elegans
Exon258249   70   X: 13688701-13688770 Caenorhabditis elegans
Exon258251   99   X: 13688986-13689084 Caenorhabditis elegans
Exon258253   152   X: 13689512-13689663 Caenorhabditis elegans
Exon258255   72   X: 13689951-13690022 Caenorhabditis elegans
Exon258257   167   X: 13690073-13690239 Caenorhabditis elegans
Exon258259   85   X: 13690290-13690374 Caenorhabditis elegans
Exon258261   534   X: 13690700-13691233 Caenorhabditis elegans
Exon258263   173   X: 13692165-13692337 Caenorhabditis elegans
Exon258265   214   X: 13692389-13692602 Caenorhabditis elegans
Exon258267   82   X: 13692701-13692782 Caenorhabditis elegans
Exon258269   115   X: 13692881-13692995 Caenorhabditis elegans
Exon258271   108   X: 13693043-13693150 Caenorhabditis elegans
Exon258273   93   X: 13693508-13693600 Caenorhabditis elegans
Exon258275   271   X: 13693648-13693918 Caenorhabditis elegans
Exon258277   134   X: 13694034-13694167 Caenorhabditis elegans
Exon258279   130   X: 13694213-13694342 Caenorhabditis elegans
Exon258282   492   X: 13695310-13695801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04A11.4a.1 13687955 13695801 1

1 Sequence

Length
3255

1 Sequence Ontology Term

Identifier Name Description
transcript