WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K11E4.4a Sequence Name  K11E4.4a
Length (nt)  1941   Chromosome Location  X: 13727302-13727373
Chromosome . Primary Identifier  X Chromosome Location . Start  13727302
Chromosome Location . End  13727373
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42239 PIX-1, isoform a 73.1 646 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00007314
WBRNAi00050605

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K11E4.4a 13727302 13727373 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010776 pix-1 K11E4.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:K11E4.4a 13727302 13727373 1
CDS:K11E4.4a 13727484 13727610 1
CDS:K11E4.4a 13727655 13727699 1
CDS:K11E4.4a 13727752 13727887 1
CDS:K11E4.4a 13728281 13728376 1
CDS:K11E4.4a 13728421 13728543 1
CDS:K11E4.4a 13728598 13728727 1
CDS:K11E4.4a 13728971 13729030 1
CDS:K11E4.4a 13729119 13729273 1
CDS:K11E4.4a 13729321 13729451 1
CDS:K11E4.4a 13729518 13729791 1
CDS:K11E4.4a 13731311 13731423 1
CDS:K11E4.4a 13731497 13731773 1
CDS:K11E4.4a 13733157 13733232 1
CDS:K11E4.4a 13733296 13733421 1

1 Sequence

Length
1941

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K11E4.4a.1 K11E4.4a.1 2936   X: 13727293-13734407