WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55F3.3a Sequence Name  F55F3.3a
Length (nt)  954   Chromosome Location  X: 13766062-13766223
Chromosome . Primary Identifier  X Chromosome Location . Start  13766062
Chromosome Location . End  13766223
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18746 NKB-3, isoform a 35.7 317 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048521
WBRNAi00015741
WBRNAi00032885

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55F3.3a 13766062 13766223 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010117 nkb-3 F55F3.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55F3.3a 13766062 13766223 -1
CDS:F55F3.3a 13766572 13766679 -1
CDS:F55F3.3a 13766727 13766855 -1
CDS:F55F3.3a 13766901 13767175 -1
CDS:F55F3.3a 13767783 13767923 -1
CDS:F55F3.3a 13768486 13768585 -1
CDS:F55F3.3a 13770474 13770512 -1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55F3.3a.1 F55F3.3a.1 1678   X: 13765384-13770558