WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1086.1a Sequence Name  ZK1086.1a
Length (nt)  2202   Chromosome Location  X: 13798639-13798800
Chromosome . Primary Identifier  X Chromosome Location . Start  13798639
Chromosome Location . End  13798800
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1086.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31672 OBR-3, isoform a 83.8 733 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00059099
WBRNAi00021799
WBRNAi00038141
WBRNAi00091933

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1086.1a 13798639 13798800 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014215 obr-3 ZK1086.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1086.1a 13798639 13798800 -1
CDS:ZK1086.1a 13799160 13799397 -1
CDS:ZK1086.1a 13799451 13799722 -1
CDS:ZK1086.1a 13800263 13800848 -1
CDS:ZK1086.1a 13800893 13801080 -1
CDS:ZK1086.1a 13801648 13801893 -1
CDS:ZK1086.1a 13801965 13802039 -1
CDS:ZK1086.1a 13802176 13802289 -1
CDS:ZK1086.1a 13802350 13802439 -1
CDS:ZK1086.1a 13802906 13803097 -1
CDS:ZK1086.1a 13809724 13809762 -1

1 Sequence

Length
2202

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1086.1a.1 ZK1086.1a.1 2742   X: 13798210-13809873