WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19D8.1a.1 Sequence Name  F19D8.1a.1
Length (nt)  1735   Chromosome Location  X: 13817500-13821084
Chromosome . Primary Identifier  X Chromosome Location . Start  13817500
Chromosome Location . End  13821084 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006676 twk-23 F19D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19D8.1a F19D8.1a 1236   X: 13817999-13818145

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19D8.1a.1 13817500 13821084 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258493   646   X: 13817500-13818145 Caenorhabditis elegans
Exon258498   146   X: 13818625-13818770 Caenorhabditis elegans
Exon258500   91   X: 13818970-13819060 Caenorhabditis elegans
Exon258502   175   X: 13819157-13819331 Caenorhabditis elegans
Exon258504   110   X: 13819377-13819486 Caenorhabditis elegans
Exon258506   83   X: 13819909-13819991 Caenorhabditis elegans
Exon258508   120   X: 13820281-13820400 Caenorhabditis elegans
Exon258510   166   X: 13820445-13820610 Caenorhabditis elegans
Exon258512   58   X: 13820663-13820720 Caenorhabditis elegans
Exon258514   140   X: 13820945-13821084 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19D8.1a.1 13817500 13821084 -1

1 Sequence

Length
1735

1 Sequence Ontology Term

Identifier Name Description
transcript