WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00202042 Gene Name  F19D8.7
Sequence Name  ? F19D8.7 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  :±
Length (nt)  ? 135
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00202042

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F19D8.7 F19D8.7 135   X: 13824542-13824676
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
gk962535
gk960724

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00202042 13824542 13824676 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_13824677..13825987   1311 X: 13824677-13825987 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00202042 13824542 13824676 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
135

1 Sequence Ontology Term