WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G3.1b.1 Sequence Name  C33G3.1b.1
Length (nt)  3333   Chromosome Location  X: 14049535-14063871
Chromosome . Primary Identifier  X Chromosome Location . Start  14049535
Chromosome Location . End  14063871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G3.1b C33G3.1b 2664   X: 14050828-14050944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.1 14049535 14063871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259096   137   X: 14049535-14049671 Caenorhabditis elegans
Exon259099   130   X: 14050815-14050944 Caenorhabditis elegans
Exon259100   72   X: 14051165-14051236 Caenorhabditis elegans
Exon259102   155   X: 14051773-14051927 Caenorhabditis elegans
Exon259104   109   X: 14051973-14052081 Caenorhabditis elegans
Exon259110   45   X: 14056546-14056590 Caenorhabditis elegans
Exon259113   67   X: 14056760-14056826 Caenorhabditis elegans
Exon259116   146   X: 14057097-14057242 Caenorhabditis elegans
Exon259119   291   X: 14058186-14058476 Caenorhabditis elegans
Exon259122   135   X: 14058592-14058726 Caenorhabditis elegans
Exon259125   153   X: 14059186-14059338 Caenorhabditis elegans
Exon259128   249   X: 14059391-14059639 Caenorhabditis elegans
Exon259131   497   X: 14059780-14060276 Caenorhabditis elegans
Exon259135   220   X: 14060476-14060695 Caenorhabditis elegans
Exon259138   96   X: 14060742-14060837 Caenorhabditis elegans
Exon259141   200   X: 14060973-14061172 Caenorhabditis elegans
Exon259146   631   X: 14063241-14063871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.1 14049535 14063871 1

1 Sequence

Length
3333

1 Sequence Ontology Term

Identifier Name Description
transcript