WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B12.6.1 Sequence Name  F16B12.6.1
Length (nt)  4456   Chromosome Location  X: 14102316-14107913
Chromosome . Primary Identifier  X Chromosome Location . Start  14102316
Chromosome Location . End  14107913 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008882 F16B12.6 F16B12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B12.6 F16B12.6 4179   X: 14102359-14102424

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16B12.6.1 14102316 14107913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259254   109   X: 14102316-14102424 Caenorhabditis elegans
Exon259255   330   X: 14102594-14102923 Caenorhabditis elegans
Exon259256   203   X: 14102978-14103180 Caenorhabditis elegans
Exon259257   291   X: 14103228-14103518 Caenorhabditis elegans
Exon259258   325   X: 14103584-14103908 Caenorhabditis elegans
Exon259259   165   X: 14103956-14104120 Caenorhabditis elegans
Exon259260   277   X: 14104170-14104446 Caenorhabditis elegans
Exon259261   173   X: 14104513-14104685 Caenorhabditis elegans
Exon259262   500   X: 14104945-14105444 Caenorhabditis elegans
Exon259263   229   X: 14105500-14105728 Caenorhabditis elegans
Exon259264   90   X: 14105779-14105868 Caenorhabditis elegans
Exon259265   141   X: 14105921-14106061 Caenorhabditis elegans
Exon259266   182   X: 14106115-14106296 Caenorhabditis elegans
Exon259267   161   X: 14106351-14106511 Caenorhabditis elegans
Exon259268   680   X: 14106587-14107266 Caenorhabditis elegans
Exon259269   600   X: 14107314-14107913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16B12.6.1 14102316 14107913 1

1 Sequence

Length
4456

1 Sequence Ontology Term

Identifier Name Description
transcript