WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H6.3.1 Sequence Name  F28H6.3.1
Length (nt)  1674   Chromosome Location  X: 14137810-14140140
Chromosome . Primary Identifier  X Chromosome Location . Start  14137810
Chromosome Location . End  14140140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009232 nkat-1 F28H6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H6.3 F28H6.3 1314   X: 14138100-14138356

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.3.1 14137810 14140140 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259261   547   X: 14137810-14138356 Caenorhabditis elegans
Exon259262   366   X: 14138408-14138773 Caenorhabditis elegans
Exon259263   318   X: 14138822-14139139 Caenorhabditis elegans
Exon259264   311   X: 14139623-14139933 Caenorhabditis elegans
Exon259265   132   X: 14140009-14140140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.3.1 14137810 14140140 -1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
transcript