WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.1a.1 Sequence Name  E02H4.1a.1
Length (nt)  2125   Chromosome Location  X: 14268081-14277080
Chromosome . Primary Identifier  X Chromosome Location . Start  14268081
Chromosome Location . End  14277080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.1a E02H4.1a 2085   X: 14268081-14268224

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1a.1 14268081 14277080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259599   144   X: 14268081-14268224 Caenorhabditis elegans
Exon259603   117   X: 14272013-14272129 Caenorhabditis elegans
Exon259606   135   X: 14272192-14272326 Caenorhabditis elegans
Exon259609   99   X: 14272638-14272736 Caenorhabditis elegans
Exon259612   91   X: 14273255-14273345 Caenorhabditis elegans
Exon259615   75   X: 14273601-14273675 Caenorhabditis elegans
Exon259618   91   X: 14273770-14273860 Caenorhabditis elegans
Exon259621   100   X: 14274612-14274711 Caenorhabditis elegans
Exon259624   179   X: 14274777-14274955 Caenorhabditis elegans
Exon259627   123   X: 14275048-14275170 Caenorhabditis elegans
Exon259630   92   X: 14275215-14275306 Caenorhabditis elegans
Exon259633   260   X: 14275570-14275829 Caenorhabditis elegans
Exon259636   118   X: 14275884-14276001 Caenorhabditis elegans
Exon259639   181   X: 14276346-14276526 Caenorhabditis elegans
Exon259642   125   X: 14276710-14276834 Caenorhabditis elegans
Exon259645   195   X: 14276886-14277080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1a.1 14268081 14277080 1

1 Sequence

Length
2125

1 Sequence Ontology Term

Identifier Name Description
transcript