WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G11.5f.1 Sequence Name  K04G11.5f.1
Length (nt)  387   Chromosome Location  X: 14353785-14354757
Chromosome . Primary Identifier  X Chromosome Location . Start  14353785
Chromosome Location . End  14354757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G11.5f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002151 irk-3 K04G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G11.5f K04G11.5f 387   X: 14353785-14353866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5f.1 14353785 14354757 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259822   82   X: 14353785-14353866 Caenorhabditis elegans
Exon259832   78   X: 14353972-14354049 Caenorhabditis elegans
Exon259840   110   X: 14354484-14354593 Caenorhabditis elegans
Exon259841   117   X: 14354641-14354757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5f.1 14353785 14354757 -1

1 Sequence

Length
387

1 Sequence Ontology Term

Identifier Name Description
transcript