WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G11.5b.1 Sequence Name  K04G11.5b.1
Length (nt)  1635   Chromosome Location  X: 14353290-14370370
Chromosome . Primary Identifier  X Chromosome Location . Start  14353290
Chromosome Location . End  14370370 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G11.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002151 irk-3 K04G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G11.5b K04G11.5b 1140   X: 14353785-14353866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5b.1 14353290 14370370 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259879   577   X: 14353290-14353866 Caenorhabditis elegans
Exon259889   78   X: 14353972-14354049 Caenorhabditis elegans
Exon259897   110   X: 14354484-14354593 Caenorhabditis elegans
Exon259906   150   X: 14354641-14354790 Caenorhabditis elegans
Exon259913   153   X: 14355422-14355574 Caenorhabditis elegans
Exon259921   166   X: 14355618-14355783 Caenorhabditis elegans
Exon259927   53   X: 14357239-14357291 Caenorhabditis elegans
Exon259930   133   X: 14357390-14357522 Caenorhabditis elegans
Exon259939   124   X: 14358328-14358451 Caenorhabditis elegans
Exon259947   70   X: 14358996-14359065 Caenorhabditis elegans
Exon259951   21   X: 14370350-14370370 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5b.1 14353290 14370370 -1

1 Sequence

Length
1635

1 Sequence Ontology Term

Identifier Name Description
transcript