WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24C2.1.1 Sequence Name  T24C2.1.1
Length (nt)  2136   Chromosome Location  X: 14550149-14556191
Chromosome . Primary Identifier  X Chromosome Location . Start  14550149
Chromosome Location . End  14556191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24C2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004301 ram-5 T24C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24C2.1 T24C2.1 2136   X: 14550149-14550239

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T24C2.1.1 14550149 14556191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260191   91   X: 14550149-14550239 Caenorhabditis elegans
Exon260192   80   X: 14551508-14551587 Caenorhabditis elegans
Exon260193   114   X: 14551646-14551759 Caenorhabditis elegans
Exon260194   137   X: 14551809-14551945 Caenorhabditis elegans
Exon260195   107   X: 14551994-14552100 Caenorhabditis elegans
Exon260196   79   X: 14552145-14552223 Caenorhabditis elegans
Exon260197   102   X: 14552333-14552434 Caenorhabditis elegans
Exon260198   64   X: 14552478-14552541 Caenorhabditis elegans
Exon260199   88   X: 14552598-14552685 Caenorhabditis elegans
Exon260200   99   X: 14552728-14552826 Caenorhabditis elegans
Exon260201   209   X: 14553641-14553849 Caenorhabditis elegans
Exon260202   179   X: 14553904-14554082 Caenorhabditis elegans
Exon260203   129   X: 14554134-14554262 Caenorhabditis elegans
Exon260204   275   X: 14555326-14555600 Caenorhabditis elegans
Exon260205   116   X: 14555701-14555816 Caenorhabditis elegans
Exon260206   140   X: 14555877-14556016 Caenorhabditis elegans
Exon260207   127   X: 14556065-14556191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T24C2.1.1 14550149 14556191 1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript