WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26G2.1e.1 Sequence Name  C26G2.1e.1
Length (nt)  2250   Chromosome Location  X: 14657990-14662575
Chromosome . Primary Identifier  X Chromosome Location . Start  14657990
Chromosome Location . End  14662575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26G2.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007750 syg-2 C26G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26G2.1e C26G2.1e 2250   X: 14657990-14658004

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26G2.1e.1 14657990 14662575 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260680   15   X: 14657990-14658004 Caenorhabditis elegans
Exon260683   157   X: 14658346-14658502 Caenorhabditis elegans
Exon260690   184   X: 14658550-14658733 Caenorhabditis elegans
Exon260696   143   X: 14659097-14659239 Caenorhabditis elegans
Exon260702   287   X: 14659294-14659580 Caenorhabditis elegans
Exon260708   137   X: 14660024-14660160 Caenorhabditis elegans
Exon260714   316   X: 14660211-14660526 Caenorhabditis elegans
Exon260720   276   X: 14660691-14660966 Caenorhabditis elegans
Exon260726   271   X: 14661017-14661287 Caenorhabditis elegans
Exon260732   155   X: 14661429-14661583 Caenorhabditis elegans
Exon260738   82   X: 14661633-14661714 Caenorhabditis elegans
Exon260746   65   X: 14661766-14661830 Caenorhabditis elegans
Exon260751   162   X: 14662414-14662575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26G2.1e.1 14657990 14662575 1

1 Sequence

Length
2250

1 Sequence Ontology Term

Identifier Name Description
transcript